STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565140Transforming protein RhoA-like. (193 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
    
 0.981
ENSSSAP00000067020
Intersectin 2b.
    
 0.981
LOC106600432
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.979
LOC106611132
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.979
LOC106569322
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.979
LOC106603369
Rho GTPase-activating protein 35-like.
    
 0.973
LOC106612372
Rho GTPase-activating protein 35-like.
    
 0.973
LOC106567838
Rho GTPase-activating protein 35-like isoform X1.
    
 0.973
LOC106570193
Rho guanine nucleotide exchange factor 2-like isoform X1.
   
 0.971
LOC106580371
Rho guanine nucleotide exchange factor 2-like isoform X3.
   
 0.971
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.