STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106562575B-cell CLL/lymphoma 7 protein family member A-like. (206 aa)    
Predicted Functional Partners:
smarcd2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
   
 
 0.722
LOC106562830
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 
 0.721
LOC100380734
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 
 0.721
LOC106585458
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 
 0.721
ss18
Protein SSXT isoform X1.
    
 
 0.615
LOC106571920
Calcium-responsive transactivator-like isoform X1.
    
 
 0.615
ss18l1
Calcium-responsive transactivator isoform X2.
    
 
 0.615
LOC106569176
Protein SSXT-like isoform X1.
    
 
 0.615
LOC106595139
Bromodomain-containing protein 9-like.
   
 
 0.612
ENSSSAP00000021992
annotation not available
   
 
 0.612
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.