STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106571370Clavesin-2. (329 aa)    
Predicted Functional Partners:
LOC106587331
AP-1 complex subunit gamma.
    
 0.543
LOC106587352
AP-1 complex subunit gamma.
    
 0.543
LOC106593828
Translocation protein SEC63 homolog isoform X2.
   
 
 0.530
LOC106569429
AP-1 complex subunit gamma.
    
 0.478
LOC100380629
AP-1 complex subunit gamma.
    
 0.478
LOC106603930
Rabankyrin-5-like isoform X2.
    
 0.477
ankfy1
Rabankyrin-5 isoform X1.
    
 0.477
LOC106603518
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.448
ENSSSAP00000027775
annotation not available
     
 0.448
LOC106585059
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.448
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.