STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565129Zinc finger and SCAN domain-containing protein 22-like isoform X2. (463 aa)    
Predicted Functional Partners:
NAIF1
Nuclear apoptosis-inducing factor 1-like.
   
 
 0.580
LOC106562838
Nuclear apoptosis-inducing factor 1-like.
   
 
 0.580
LOC106601548
Uncharacterized protein LOC106601548; Belongs to the NGF-beta family.
    
 
 0.497
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 
 0.497
qrich1
Glutamine-rich protein 1 isoform X1.
      
 0.467
LOC106610742
piggyBac transposable element-derived protein 5-like.
   
  
 0.431
LOC106589661
piggyBac transposable element-derived protein 5-like.
   
  
 0.431
pigl
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
   
    0.426
LOC106577663
High affinity immunoglobulin epsilon receptor subunit gamma-like isoform X1.
   
 
 0.408
LOC106608748
High affinity immunoglobulin epsilon receptor subunit gamma-like isoform X1.
   
 
 0.408
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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