STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem256Transmembrane protein 256. (114 aa)    
Predicted Functional Partners:
ttc27
Tetratricopeptide repeat protein 27 isoform X2.
      
 0.511
ENSSSAP00000031065
23S rRNA (uridine2552-2'-O)-methyltransferase.
      
 0.510
LOC106607333
rRNA methyltransferase 2, mitochondrial-like isoform X1.
      
 0.510
thumpd2
THUMP domain-containing protein 2.
     
 0.498
tmem160
Transmembrane protein 160.
   
  
 0.487
lyrm9
LYR motif-containing protein 9; Belongs to the complex I LYR family.
      
 0.475
lacc1
Laccase domain-containing protein 1.
      
 0.454
LOC106572212
Transcription initiation factor TFIID subunit 10-like isoform X1.
   
  
 0.444
LOC106566962
Transcription initiation factor TFIID subunit 10-like.
   
  
 0.444
cssa24h22orf39
UPF0545 protein C22orf39 homolog.
      
 0.432
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.