Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000000041annotation not available (834 aa)    
Predicted Functional Partners:
GPR139
Probable G-protein coupled receptor 139.
    
 
 0.705
ENSSTUP00000107893
annotation not available
    
 
 0.705
LOC115175796
Krev interaction trapped protein 1-like.
    
 0.699
krit1
KRIT1 ankyrin repeat containing.
    
 0.699
LOC115158477
Histone H2A deubiquitinase MYSM1-like.
    
  0.584
LOC115192420
Histone H2A deubiquitinase MYSM1-like.
    
  0.584
LOC115163741
Programmed cell death protein 10.
    
 0.578
LOC115183983
Programmed cell death protein 10-like.
    
 0.578
LOC115196181
Programmed cell death protein 10-B-like.
    
 0.578
wdr90
WD repeat domain 90.
    
  0.572
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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