Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000000054annotation not available (54 aa)    
Predicted Functional Partners:
LOC115160893
Armadillo repeat-containing protein 8.
    
 0.921
ENSSTUP00000026302
Armadillo repeat containing 8.
    
 0.921
LOC115168286
E3 ubiquitin-protein transferase RMND5B-like.
    
 
 0.865
LOC115205615
E3 ubiquitin-protein transferase RMND5B-like.
    
 
 0.865
LOC115196797
Ran-binding protein 10-like.
   
 
 0.861
ENSSTUP00000068913
RAN binding protein 10.
   
 
 0.861
ranbp9
RAN binding protein 9.
   
 
 0.854
maea
Macrophage erythroblast attacher.
    
 
 0.837
ENSSTUP00000101369
annotation not available
    
 
 0.837
LOC115191688
WD repeat-containing protein 26-like.
   
 
 0.819
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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