Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115193610Peptidyl-prolyl cis-trans isomerase A-like. (224 aa)    
Predicted Functional Partners:
slc25a4
ADP/ATP translocase 2.
   
 0.916
slc25a4-2
ADP/ATP translocase 2.
   
 0.916
LOC115154811
ADP/ATP translocase 2-like.
   
 0.903
LOC115172575
ADP/ATP translocase 2-like.
   
 0.903
ENSSTUP00000070467
annotation not available
   
 0.903
LOC115204416
ADP/ATP translocase 2-like.
   
 0.903
LOC115148557
Voltage-dependent anion-selective channel protein 1-like.
   
 0.901
VDAC2
Voltage-dependent anion-selective channel protein 2-like.
   
 0.901
LOC115153358
Voltage-dependent anion-selective channel protein 2-like.
   
 0.901
LOC115149285
Voltage-dependent anion-selective channel protein 2-like.
   
 0.901
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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