Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115203720CD2 antigen cytoplasmic tail-binding protein 2-like. (381 aa)    
Predicted Functional Partners:
ENSSTUP00000051930
pre-mRNA processing factor 8.
    
 0.961
ENSSTUP00000105749
pre-mRNA processing factor 8.
    
 0.961
LOC115173717
Thioredoxin-like protein 4A.
   
 0.957
LOC115165358
Small nuclear ribonucleoprotein G.
    
 0.944
snrpb
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 
 0.937
LOC115197538
116 kDa U5 small nuclear ribonucleoprotein component-like.
    
 
 0.922
LOC115171073
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.922
LOC115173854
U5 small nuclear ribonucleoprotein 40 kDa protein-like.
   
 0.920
LOC115175341
U5 small nuclear ribonucleoprotein 40 kDa protein-like.
   
 0.920
LOC115166182
Probable ATP-dependent RNA helicase DDX23.
   
 
 0.918
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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