Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115175711F-box/LRR-repeat protein 4-like. (613 aa)    
Predicted Functional Partners:
ENSSTUP00000006246
S-phase kinase-associated protein 1.
    
 0.924
ENSSTUP00000006263
annotation not available
    
 0.924
ENSSTUP00000056505
S-phase kinase-associated protein 1.
    
 0.924
LOC115169709
Cullin-1.
    
 0.893
LOC115157067
Cullin-1-like.
    
 0.893
CUL1
Cullin-1-like.
    
 0.893
LOC115200076
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.808
LOC115159484
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.808
LOC115204154
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.808
LOC115152711
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.799
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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