STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000000466annotation not available (333 aa)    
Predicted Functional Partners:
ENSSTUP00000012855
WD repeat domain 18.
   
 0.644
wdr18
WD repeat domain 18.
   
 0.644
LOC115208746
Rhomboid-related protein 3-like.
    
  0.633
LOC115180981
Testis-expressed protein 10 homolog.
    
 0.624
LOC115180981-2
Testis-expressed protein 10 homolog.
    
 0.624
LOC115199797
Pescadillo homolog.
   
 0.620
PES1
Pescadillo homolog.
   
 0.620
mrpl2
Mitochondrial ribosomal protein L2.
    
 0.578
LOC115208510
Inactive tyrosine-protein kinase 7-like.
   
  0.573
LOC115178079
Inactive tyrosine-protein kinase 7-like.
   
  0.573
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.