STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001003annotation not available (484 aa)    
Predicted Functional Partners:
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.456
mrps14
Mitochondrial ribosomal protein S14.
    
 
 0.430
HSPBP1
HSPA (Hsp70) binding protein 1.
   
 0.417
rpl10
Ribosomal protein L10.
   
 0.417
LOC115204251
28S ribosomal protein S12, mitochondrial-like.
    
 
 0.417
ENSSTUP00000030287
annotation not available
   
 0.417
SIL1
SIL1 nucleotide exchange factor.
   
 0.417
LOC115154655
28S ribosomal protein S12, mitochondrial-like.
    
 
 0.417
ENSSTUP00000088897
SIL1 nucleotide exchange factor.
   
 0.417
LOC115171860
Hsp70-binding protein 1-like.
   
 0.417
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.