Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP3CAProtein phosphatase 3 catalytic subunit alpha. (684 aa)    
Predicted Functional Partners:
LOC115177589
Calcineurin subunit B type 1.
   
 0.951
LOC115177589-2
Calcineurin subunit B type 1.
   
 0.951
LOC115156000-2
Calcineurin subunit B type 1-like.
   
 0.951
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1-like.
    
 0.949
ENSSTUP00000086767
annotation not available
    
 0.949
NFATC1-2
Nuclear factor of activated T-cells, cytoplasmic 1-like.
    
 0.949
LOC115173373
Nuclear factor of activated T-cells, cytoplasmic 1-like.
    
 0.949
LOC115153320
Anaphase-promoting complex subunit 1-like.
    
 0.939
LOC115165591
Nuclear factor of activated T-cells, cytoplasmic 2-like.
    
 0.930
LOC115156000
Calcineurin subunit B type 1-like.
    
 0.922
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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