LOC115155826 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC115155826

Calcium uniporter protein, mitochondrial-like. (369 aa)

Predicted Functional Partners:

micu1

0.980

ENSSTUP00000063917

0.980

ENSSTUP00000005737

0.970

ENSSTUP00000028038

0.970

ENSSTUP00000007977

0.963

ENSSTUP00000069231

0.963

ENSSTUP00000075690

0.963

ENSSTUP00000091164

0.963

LOC115191680

0.962

LOC115205538

0.962

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000005737	ENSSTUP00000007977	ENSSTUP00000005737	ENSSTUP00000007977	annotation not available	annotation not available	0.976
ENSSTUP00000005737	ENSSTUP00000028038	ENSSTUP00000005737	ENSSTUP00000028038	annotation not available	Mitochondrial calcium uptake 2.	0.543
ENSSTUP00000005737	ENSSTUP00000063917	ENSSTUP00000005737	ENSSTUP00000063917	annotation not available	annotation not available	0.993
ENSSTUP00000005737	ENSSTUP00000069231	ENSSTUP00000005737	ENSSTUP00000069231	annotation not available	annotation not available	0.976
ENSSTUP00000005737	ENSSTUP00000075690	ENSSTUP00000005737	ENSSTUP00000075690	annotation not available	annotation not available	0.976
ENSSTUP00000005737	ENSSTUP00000091164	ENSSTUP00000005737	ENSSTUP00000091164	annotation not available	annotation not available	0.976
ENSSTUP00000005737	LOC115155826	ENSSTUP00000005737	ENSSTUP00000001014	annotation not available	Calcium uniporter protein, mitochondrial-like.	0.970
ENSSTUP00000005737	LOC115191680	ENSSTUP00000005737	ENSSTUP00000001033	annotation not available	Calcium uptake protein 3, mitochondrial-like.	0.873
ENSSTUP00000005737	LOC115205538	ENSSTUP00000005737	ENSSTUP00000089946	annotation not available	Calcium uptake protein 3, mitochondrial-like.	0.877
ENSSTUP00000005737	micu1	ENSSTUP00000005737	ENSSTUP00000000923	annotation not available	Mitochondrial calcium uptake 1.	0.993
ENSSTUP00000007977	ENSSTUP00000005737	ENSSTUP00000007977	ENSSTUP00000005737	annotation not available	annotation not available	0.976
ENSSTUP00000007977	ENSSTUP00000028038	ENSSTUP00000007977	ENSSTUP00000028038	annotation not available	Mitochondrial calcium uptake 2.	0.976
ENSSTUP00000007977	ENSSTUP00000063917	ENSSTUP00000007977	ENSSTUP00000063917	annotation not available	annotation not available	0.981
ENSSTUP00000007977	ENSSTUP00000069231	ENSSTUP00000007977	ENSSTUP00000069231	annotation not available	annotation not available	0.548
ENSSTUP00000007977	ENSSTUP00000075690	ENSSTUP00000007977	ENSSTUP00000075690	annotation not available	annotation not available	0.545
ENSSTUP00000007977	ENSSTUP00000091164	ENSSTUP00000007977	ENSSTUP00000091164	annotation not available	annotation not available	0.548
ENSSTUP00000007977	LOC115155826	ENSSTUP00000007977	ENSSTUP00000001014	annotation not available	Calcium uniporter protein, mitochondrial-like.	0.963
ENSSTUP00000007977	LOC115191680	ENSSTUP00000007977	ENSSTUP00000001033	annotation not available	Calcium uptake protein 3, mitochondrial-like.	0.966
ENSSTUP00000007977	LOC115205538	ENSSTUP00000007977	ENSSTUP00000089946	annotation not available	Calcium uptake protein 3, mitochondrial-like.	0.966
ENSSTUP00000007977	micu1	ENSSTUP00000007977	ENSSTUP00000000923	annotation not available	Mitochondrial calcium uptake 1.	0.981