Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115193930Alpha-2,8-sialyltransferase 8F-like. (353 aa)    
Predicted Functional Partners:
LOC115203736
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6-like.
     
 0.841
st6galnac6
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6.
     
 0.841
LOC115159921
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like.
  
  
0.822
ENSSTUP00000076222
annotation not available
  
  
 0.802
st6galnac3
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3.
     
 0.794
LOC115158014
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like.
  
  
0.774
LOC115151575
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like.
  
  
0.771
ENSSTUP00000005375
annotation not available
  
  
0.768
LOC115180086
alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like.
   
 
  0.746
LOC115199122
alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like.
   
 
  0.746
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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