Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115188903RNA binding protein fox-1 homolog 1-like. (389 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.708
LOC115165358
Small nuclear ribonucleoprotein G.
    
 0.703
polr2h
RNA polymerase II subunit H.
   
 
 0.675
ENSSTUP00000008906
annotation not available
   
 0.666
LOC115171994
RNA binding protein fox-1 homolog 1-like.
   
 0.666
LOC115200473
RNA binding protein fox-1 homolog 2-like.
   
 0.666
ENSSTUP00000092090
RNA binding fox-1 homolog 2.
   
 0.666
ENSSTUP00000106741
annotation not available
   
 0.666
LOC115171400
Nuclear cap-binding protein subunit 1.
    
 0.664
NCBP1
Nuclear cap-binding protein subunit 1-like.
    
 0.664
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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