STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem214Transmembrane protein 214. (684 aa)    
Predicted Functional Partners:
LOC115150803
Protein transport protein Sec61 subunit alpha.
   
  
 0.709
SEC61A1
Protein transport protein Sec61 subunit alpha.
   
  
 0.709
LOC115207623
Protein transport protein Sec61 subunit alpha.
   
  
 0.709
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.672
LOC115150543
Protein transport protein Sec61 subunit alpha-like.
   
  
 0.650
LOC115192010
Mannosyl-oligosaccharide glucosidase-like.
   
  
 0.633
LOC115202092
Mannosyl-oligosaccharide glucosidase-like.
   
  
 0.633
LOC115199069
Cytoskeleton-associated protein 4-like.
    
 
 0.589
LOC115180396
Cytoskeleton-associated protein 4-like.
    
 
 0.589
ENSSTUP00000052694
annotation not available
    
 
 0.585
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.