Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem214Transmembrane protein 214. (684 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.817
ndc1
NDC1 transmembrane nucleoporin.
      
 0.754
ogfod3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.748
rhbdd1
Rhomboid domain containing 1.
      
 0.743
ENSSTUP00000084497
Phosphatidylinositol glycan anchor biosynthesis, class B.
      
 0.734
LOC115169758
Transmembrane protein 53-like.
      
 0.712
ENSSTUP00000057674
SEH1-like (S. cerevisiae).
    
   0.712
SEH1L
Nucleoporin SEH1.
    
   0.712
seh1l
SEH1 like nucleoporin.
    
   0.712
tmem53
Transmembrane protein 53.
      
 0.712
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.