Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001060Oncoprotein induced transcript 3. (554 aa)    
Predicted Functional Partners:
ENSSTUP00000037020
MAP6 domain containing 1.
    
 0.761
ENSSTUP00000064975
MAP6 domain containing 1.
    
 0.761
ENSSTUP00000023435
annotation not available
    
 0.758
ENSSTUP00000031465
Mediator complex subunit 24.
    
 0.758
ENSSTUP00000002858
Stabilin 1.
   
 
 0.721
ENSSTUP00000021461
Stabilin 2.
   
 
 0.721
txndc16
Thioredoxin domain containing 16.
    
 0.710
LOC115168192
E3 ubiquitin-protein ligase MIB2-like.
   
 0.679
MIB2
E3 ubiquitin-protein ligase MIB2-like.
   
 0.679
LOC115201478
piggyBac transposable element-derived protein 5-like.
    
 
 0.675
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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