Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115168133Stanniocalcin-2-like. (286 aa)    
Predicted Functional Partners:
LOC115201373
Extracellular serine/threonine protein kinase FAM20C-like.
     
 0.764
ENSSTUP00000008925
FAM20C golgi associated secretory pathway kinase b.
     
 0.764
LOC115196223
Extracellular serine/threonine protein kinase FAM20C-like.
     
 0.630
ENSSTUP00000062311
Family with sequence similarity 20 member C, like.
     
 0.630
LOC115147470
Extracellular serine/threonine protein kinase FAM20C-like.
     
 0.630
LOC115168147
Vesicle transport protein SEC20-like.
      
 0.605
ENSSTUP00000103287
BCL2 interacting protein 1a.
      
 0.605
nsmaf
Neutral sphingomyelinase activation associated factor.
      
 0.553
LOC115199725
Serine-rich coiled-coil domain-containing protein 1-like.
      
 0.522
LOC115164972
Serine-rich coiled-coil domain-containing protein 1-like.
      
 0.522
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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