Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC11516816260S ribosomal protein L26. (145 aa)    
Predicted Functional Partners:
ENSSTUP00000004093
Ribosomal protein L39.
  
 0.998
rpl12
Ribosomal protein L12.
  
 0.998
rpl9
Ribosomal protein L9.
 
 0.998
ENSSTUP00000011885
Ribosomal protein L27.
  
 0.996
rpl21
60S ribosomal protein L21.
   
 0.996
LOC115171473
60S ribosomal protein L27.
  
 0.996
LOC115173835
60S ribosomal protein L14-like.
  
 0.996
LOC115194089
60S ribosomal protein L34.
  
 0.996
ENSSTUP00000087574
Ribosomal protein L6.
  
 0.996
rpl21-2
60S ribosomal protein L21.
   
 0.996
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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