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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001111ATP/GTP binding protein-like 5. (708 aa)    
Predicted Functional Partners:
ttll4
Tubulin tyrosine ligase like 4.
    
 
 0.668
ENSSTUP00000053758
Armadillo repeat containing 2.
    
 
 0.548
b3galnt2
beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.546
ttll6
Tubulin tyrosine ligase like 6.
      
 0.545
cep41
Centrosomal protein 41.
      
 0.543
glipr1
GLI pathogenesis related 1.
      
 0.541
ENSSTUP00000106496
annotation not available
      
 0.541
ENSSTUP00000046387
annotation not available
      
 0.540
LOC115149534
YTH domain-containing protein 1-like.
      
 0.539
ythdc1
YTH domain containing 1.
      
 0.539
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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