Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115206256SUN domain-containing protein 1-like. (1094 aa)    
Predicted Functional Partners:
ENSSTUP00000102151
annotation not available
    
 0.909
LOC115204191
SUN domain-containing protein 2-like.
     
0.891
LOC115160060
SUN domain-containing protein 1-like.
     
0.891
LOC115158027
SUN domain-containing protein 2-like.
     
0.891
ENSSTUP00000091246
annotation not available
     
0.891
lmnb2
Lamin B2.
    
 0.887
lmnb1
Lamin B1.
    
 0.881
ENSSTUP00000008842
annotation not available
    
 0.874
ENSSTUP00000031145
annotation not available
    
 0.874
LOC115176110
lamin-A-like.
    
 0.867
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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