close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115206256SUN domain-containing protein 1-like. (1094 aa)    
Predicted Functional Partners:
lmnb2
Lamin B2.
    
 0.801
lmnb1
Lamin B1.
    
 0.787
ENSSTUP00000013780
annotation not available
    
 
 0.787
ENSSTUP00000008842
annotation not available
    
 0.769
ENSSTUP00000020990
Spectrin repeat containing, nuclear envelope 1b.
    
 0.769
ENSSTUP00000031145
annotation not available
    
 0.769
ENSSTUP00000052237
Spectrin repeat containing, nuclear envelope 1a.
    
 0.769
ENSSTUP00000067462
annotation not available
    
 0.769
ENSSTUP00000093561
Spectrin repeat containing, nuclear envelope 1b.
    
 0.769
ENSSTUP00000102058
Spectrin repeat containing, nuclear envelope 2b.
    
 0.769
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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