Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115171356ADP-ribosylation factor-like protein 9. (248 aa)    
Predicted Functional Partners:
ENSSTUP00000009862
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.750
LOC115153155
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like.
    
 0.750
LOC115199126
Coatomer subunit gamma-2.
    
 0.749
LOC115180523
Coatomer subunit gamma-2.
    
 0.749
ENSSTUP00000002689
ADP-ribosylation factor GTPase activating protein 1.
   
 0.743
LOC115150410
ADP-ribosylation factor GTPase-activating protein 1-like.
   
 0.743
ENSSTUP00000053905
annotation not available
    
 0.741
ENSSTUP00000070599
Intersectin 2b.
    
 0.741
ENSSTUP00000088458
Cyclin G associated kinase.
    
  0.741
LOC115167087
Coatomer subunit beta-like.
   
 0.730
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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