Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115193604Monocarboxylate transporter 12-B-like. (628 aa)    
Predicted Functional Partners:
emb
Embigin.
    
 0.746
ENSSTUP00000026653
Basigin.
    
 0.745
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 
 0.561
LOC115194109
DNA polymerase zeta catalytic subunit-like.
    
 
 0.561
asb4
Ankyrin repeat and SOCS box containing 4.
      
 0.538
cfap161
Cilia and flagella associated protein 161.
      
 0.536
ENSSTUP00000076014
FA complementation group D2.
    
 
 0.532
PRPF6
pre-mRNA processing factor 6.
      
 0.531
prpf6
pre-mRNA processing factor 6.
      
 0.531
LOC115158225
Basigin-like.
     
  0.508
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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