Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDIT4LDNA damage inducible transcript 4 like. (193 aa)    
Predicted Functional Partners:
ENSSTUP00000011895
TSC complex subunit 2.
    
 0.964
LOC115192283
TBC1 domain family member 7-like.
     
 0.734
ENSSTUP00000031528
TBC1 domain family, member 7.
     
 0.734
LOC115204136
Hamartin-like.
   
 
 0.706
LOC115159506
Hamartin-like.
   
 
 0.706
tsc1
TSC complex subunit 1.
   
 
 0.706
LOC115206424
Heat shock protein 75 kDa, mitochondrial-like.
   
 
 0.631
LOC115168508
Heat shock protein HSP 90-alpha-like.
   
 
 0.631
ENSSTUP00000007125
annotation not available
   
 
 0.631
LOC115174522
Heat shock protein HSP 90-alpha.
   
 
 0.631
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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