Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001247annotation not available (595 aa)    
Predicted Functional Partners:
ENSSTUP00000010802
annotation not available
    
 
 0.873
ENSSTUP00000010870
annotation not available
    
 
 0.873
LOC115161893
Galectin-3-like.
    
 
 0.873
LOC115174487
Galectin-3-like.
    
 
 0.873
LOC115162068
Galectin-3-like.
    
 
 0.873
LOC115172338
Galectin-5-like.
    
 
 0.873
tubgcp6
Tubulin gamma complex associated protein 6.
    
   0.839
ENSSTUP00000057529
Tubulin, gamma complex associated protein 3.
    
   0.814
ENSSTUP00000100953
Tubulin, gamma complex associated protein 3.
    
   0.814
TUBGCP2
Gamma-tubulin complex component 2-like.
    
   0.790
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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