Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115197024Homeobox protein Hox-B9a. (249 aa)    
Predicted Functional Partners:
LOC115150293
Protein BTG2-like.
    
 
 0.689
LOC115208140
Protein BTG2-like.
    
 
 0.689
LOC115196988
Homeobox protein Hox-B6a-like.
   
 
 0.671
LOC115201037
Homeobox protein Hox-B6b-like.
   
 
 0.671
LOC115158642
Homeobox protein Hox-B6b-like.
   
 
 0.671
LOC115171010
Homeobox protein Hox-B6a.
   
 
 0.671
LOC115201036
Homeobox protein Hox-B5b-like.
   
 
 0.644
hoxb5
Homeobox B5.
   
 
 0.644
LOC115171008
Homeobox protein Hox-B5a.
   
 
 0.644
LOC115197017
Homeobox protein Hox-B7a-like.
   
 
 0.577
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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