Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001277Even-skipped-like1. (229 aa)    
Predicted Functional Partners:
ENSSTUP00000088026
Unc-5 netrin receptor A.
    
 
 0.597
rere
Arginine-glutamic acid dipeptide repeats.
    
   0.531
ENSSTUP00000019894
Arginine-glutamic acid dipeptide (RE) repeats b.
    
   0.531
ENSSTUP00000028194
Arginine-glutamic acid dipeptide (RE) repeats a.
    
   0.531
ENSSTUP00000086612
Atrophin 1.
    
   0.531
ENSSTUP00000098417
Arginine-glutamic acid dipeptide (RE) repeats b.
    
   0.531
LOC115205159
Homeodomain-only protein-like.
      
 0.523
LOC115196988
Homeobox protein Hox-B6a-like.
   
 
 0.520
LOC115201037
Homeobox protein Hox-B6b-like.
   
 
 0.520
LOC115158642
Homeobox protein Hox-B6b-like.
   
 
 0.520
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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