Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001280Cytohesin 1a. (416 aa)    
Predicted Functional Partners:
ENSSTUP00000008318
annotation not available
    
 0.950
LOC115172578
ADP-ribosylation factor 6.
    
 0.950
pik3cd
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
   
  0.866
ENSSTUP00000111631
Si:rp71-17i16.5.
   
  0.865
ENSSTUP00000007099
annotation not available
   
  0.814
LOC115206538
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform-like.
   
  0.814
PIK3CB
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
   
  0.814
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
   
  0.814
ENSSTUP00000110487
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha.
   
  0.814
PIK3CA-2
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
   
  0.814
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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