Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001282annotation not available (362 aa)    
Predicted Functional Partners:
LOC115149207
TP53-regulated inhibitor of apoptosis 1-like.
    
 0.966
ENSSTUP00000109733
TP53 regulated inhibitor of apoptosis 1.
    
 0.966
LOC115207353
PRELI domain containing protein 3B-like.
    
 0.864
PRELID3B
PRELI domain containing protein 3B-like.
    
 0.864
ENSSTUP00000061499
annotation not available
    
 0.864
LOC115168331
PRELI domain containing protein 3B-like.
    
 0.864
ENSSTUP00000077489
annotation not available
   
 
 0.785
CRLS1
Cardiolipin synthase 1.
   
 
 0.694
LOC115197569
Prohibitin-like.
   
 
 0.677
LOC115171076
Prohibitin.
   
 
 0.677
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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