ENSSTUP00000001286 protein (Salmo trutta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSTUP00000001286

annotation not available (201 aa)

Predicted Functional Partners:

CDH18

0.779

CDH18-2

0.779

LOC115195872

0.779

CDH18-3

0.779

vsx1

0.538

LOC115153115

0.538

ENSSTUP00000109547

0.538

nrn1

0.412

LOC115195851

0.412

LOC115154986

0.410

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH18	ENSSTUP00000001286	ENSSTUP00000016241	ENSSTUP00000001286	Cadherin-18-like.	annotation not available	0.779
CDH18-2	ENSSTUP00000001286	ENSSTUP00000027175	ENSSTUP00000001286	Cadherin-18-like.	annotation not available	0.779
CDH18-3	ENSSTUP00000001286	ENSSTUP00000101221	ENSSTUP00000001286	Cadherin-18-like.	annotation not available	0.779
ENSSTUP00000001286	CDH18	ENSSTUP00000001286	ENSSTUP00000016241	annotation not available	Cadherin-18-like.	0.779
ENSSTUP00000001286	CDH18-2	ENSSTUP00000001286	ENSSTUP00000027175	annotation not available	Cadherin-18-like.	0.779
ENSSTUP00000001286	CDH18-3	ENSSTUP00000001286	ENSSTUP00000101221	annotation not available	Cadherin-18-like.	0.779
ENSSTUP00000001286	ENSSTUP00000109547	ENSSTUP00000001286	ENSSTUP00000109547	annotation not available	Cancer susceptibility candidate 1.	0.538
ENSSTUP00000001286	LOC115153115	ENSSTUP00000001286	ENSSTUP00000065389	annotation not available	Visual system homeobox 1-like.	0.538
ENSSTUP00000001286	LOC115154986	ENSSTUP00000001286	ENSSTUP00000007632	annotation not available	Guanylyl cyclase-activating protein 1-like.	0.410
ENSSTUP00000001286	LOC115195851	ENSSTUP00000001286	ENSSTUP00000024034	annotation not available	Neuritin.	0.412
ENSSTUP00000001286	LOC115195872	ENSSTUP00000001286	ENSSTUP00000027892	annotation not available	Cadherin-18-like.	0.779
ENSSTUP00000001286	nrn1	ENSSTUP00000001286	ENSSTUP00000023507	annotation not available	Neuritin 1.	0.412
ENSSTUP00000001286	vsx1	ENSSTUP00000001286	ENSSTUP00000021939	annotation not available	Visual system homeobox 1.	0.538
ENSSTUP00000109547	ENSSTUP00000001286	ENSSTUP00000109547	ENSSTUP00000001286	Cancer susceptibility candidate 1.	annotation not available	0.538
LOC115153115	ENSSTUP00000001286	ENSSTUP00000065389	ENSSTUP00000001286	Visual system homeobox 1-like.	annotation not available	0.538
LOC115154986	ENSSTUP00000001286	ENSSTUP00000007632	ENSSTUP00000001286	Guanylyl cyclase-activating protein 1-like.	annotation not available	0.410
LOC115195851	ENSSTUP00000001286	ENSSTUP00000024034	ENSSTUP00000001286	Neuritin.	annotation not available	0.412
LOC115195872	ENSSTUP00000001286	ENSSTUP00000027892	ENSSTUP00000001286	Cadherin-18-like.	annotation not available	0.779
nrn1	ENSSTUP00000001286	ENSSTUP00000023507	ENSSTUP00000001286	Neuritin 1.	annotation not available	0.412
vsx1	ENSSTUP00000001286	ENSSTUP00000021939	ENSSTUP00000001286	Visual system homeobox 1.	annotation not available	0.538