Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppatPhosphoribosyl pyrophosphate amidotransferase. (541 aa)    
Predicted Functional Partners:
ENSSTUP00000011835
Phosphoribosylglycinamide formyltransferase.
 
 0.999
gart
annotation not available
 
 0.999
LOC115196400
Bifunctional purine biosynthesis protein PURH-like.
 
 0.993
LOC115179126
Bifunctional purine biosynthesis protein PURH-like.
 
 0.993
LOC115192372
Uncharacterized LOC115192372.
 
 0.991
LOC115158545
Multifunctional protein ADE2-like.
 
 0.991
LOC115196283
Adenylosuccinate lyase-like.
  
 
 0.976
LOC115170919
Adenylosuccinate lyase-like.
  
 
 0.976
cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 
 0.970
ENSSTUP00000090387
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 
 0.970
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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