Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115189028CCR4-NOT transcription complex subunit 3-like. (958 aa)    
Predicted Functional Partners:
ENSSTUP00000023016
CCR4-NOT transcription complex, subunit 1.
   
 0.981
ENSSTUP00000028200
CCR4-NOT transcription complex, subunit 1.
   
 0.981
ENSSTUP00000009777
CCR4-NOT transcription complex, subunit 10.
   
 0.975
LOC115155681
CCR4-NOT transcription complex subunit 11.
    
 0.975
LOC115177149
CCR4-NOT transcription complex subunit 10-like.
   
 0.975
ENSSTUP00000103987
CCR4-NOT transcription complex, subunit 11.
    
 0.975
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.962
ENSSTUP00000058629
CCR4-NOT transcription complex subunit 9.
    
 0.962
ENSSTUP00000116030
CCR4-NOT transcription complex subunit 9.
    
 0.962
ENSSTUP00000078264
CCR4-NOT transcription complex, subunit 4b.
   
 0.961
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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