Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115205227Cytochrome b-c1 complex subunit 2, mitochondrial-like. (530 aa)    
Predicted Functional Partners:
LOC115173997
Cytochrome b-c1 complex subunit 7-like.
   
 0.999
LOC115208399
Cytochrome c1, heme protein, mitochondrial-like.
   
 0.997
LOC115151119
Cytochrome c1, heme protein, mitochondrial-like.
   
 0.997
LOC115167462
Cytochrome b-c1 complex subunit 8-like.
   
 0.995
LOC115149201
Cytochrome b-c1 complex subunit 9-like.
   
 0.995
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial-like.
   
 0.995
LOC115205689
Cytochrome b-c1 complex subunit 8-like.
   
 0.995
UQCRFS1-2
Cytochrome b-c1 complex subunit Rieske, mitochondrial-like.
   
 0.995
UQCR10
Cytochrome b-c1 complex subunit 9-like.
   
 0.995
ENSSTUP00000114351
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.995
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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