STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001333Flap structure-specific endonuclease 1. (281 aa)    
Predicted Functional Partners:
wrn
WRN RecQ like helicase.
  
 0.998
ENSSTUP00000074685
Ligase I, DNA, ATP-dependent.
  
 0.997
ENSSTUP00000010958
Proliferating cell nuclear antigen.
  
 0.994
ENSSTUP00000019540
annotation not available
  
 0.994
mre11
MRE11 homolog, double strand break repair nuclease.
  
 0.994
PCNA
Proliferating cell nuclear antigen.
  
 0.994
LOC115200315
Proliferating cell nuclear antigen-like.
  
 0.994
LOC115207651
DNA polymerase delta catalytic subunit-like.
  
 0.993
pold2
DNA polymerase delta 2, accessory subunit.
  
 0.993
LOC115171850
DNA polymerase delta catalytic subunit-like.
  
 0.993
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.