Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115167361Consortin-like. (446 aa)    
Predicted Functional Partners:
LOC115198682
V-type proton ATPase subunit F.
  
 0.973
LOC115198928
V-type proton ATPase subunit E 1-like.
  
 0.973
LOC115197429
V-type proton ATPase subunit E 1-like.
  
 0.973
LOC115180012
V-type proton ATPase subunit E 1-like.
  
 0.973
LOC115180644
V-type proton ATPase subunit F-like.
  
 0.973
LOC115176536
V-type proton ATPase subunit C 1-A.
   
 0.968
ENSSTUP00000057371
ATPase H+ transporting V1 subunit C1a.
   
 0.968
LOC115193839
V-type proton ATPase subunit B, brain isoform-like.
  
 0.967
ENSSTUP00000013771
annotation not available
  
 0.967
LOC115153160
V-type proton ATPase subunit B, brain isoform.
  
 0.967
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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