Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001358annotation not available (435 aa)    
Predicted Functional Partners:
ENSSTUP00000078948
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
  0.819
ENSSTUP00000017512
annotation not available
    
  0.750
ENSSTUP00000023719
WD repeat and FYVE domain containing 3.
    
  0.750
LOC115173951
Tax1-binding protein 1 homolog A-like.
    
  0.735
LOC115175465
Tax1-binding protein 1 homolog B-like.
    
  0.735
sqstm1
Sequestosome 1.
     
  0.728
LOC115208534
Microtubule-associated proteins 1A/1B light chain 3C-like.
     
  0.728
ENSSTUP00000070939
annotation not available
     
  0.728
LOC115171017
Sequestosome-1-like.
     
  0.728
tomm70
Translocase of outer mitochondrial membrane 70.
     
  0.728
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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