STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001367Saccharopine dehydrogenase b. (358 aa)    
Predicted Functional Partners:
GLRX
Glutaredoxin.
    
   0.605
GLRX-2
Glutaredoxin.
    
   0.605
GLRX-3
Glutaredoxin-1-like.
    
   0.605
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
     
  0.585
LOC115170069
alpha-2-HS-glycoprotein-like.
     
  0.585
LOC115205957
Transmembrane protein 160-like.
    
   0.570
LOC115192728
Alpha-aminoadipic semialdehyde synthase, mitochondrial-like.
     
  0.565
ENSSTUP00000019824
NHL repeat containing 2.
     
  0.562
LOC115168754
Non-structural maintenance of chromosomes element 3 homolog.
     
  0.558
LOC115168558
Coagulation factor VIII-like.
   
 
  0.549
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.