Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115189079TCF3 fusion partner homolog. (211 aa)    
Predicted Functional Partners:
ino80e
INO80 complex subunit E.
   
 0.997
ENSSTUP00000093510
Actin related protein 8.
    
 0.996
ino80
INO80 complex ATPase subunit.
    
 0.994
ENSSTUP00000046921
annotation not available
    
 0.989
LOC115207956
Microspherule protein 1-like.
    
 0.989
LOC115204349
Nuclear factor related to kappa-B-binding protein-like.
    
 0.989
LOC115154731
Nuclear factor related to kappa-B-binding protein-like.
    
 0.989
LOC115176758
INO80 complex subunit C-like.
    
 0.989
actr5
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2.
    
 0.987
ENSSTUP00000106503
annotation not available
    
 0.987
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.