Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001375annotation not available (226 aa)    
Predicted Functional Partners:
flt3
Fms related tyrosine kinase 3.
    
 0.974
LOC115192386
Platelet-derived growth factor receptor alpha-like.
    
 0.969
ENSSTUP00000023239
Platelet-derived growth factor receptor, alpha polypeptide.
    
 0.969
LOC115205391
Platelet-derived growth factor receptor beta-like.
    
 0.942
PDGFRB
Platelet-derived growth factor receptor beta-like.
    
 0.942
PDGFRB-2
Platelet-derived growth factor receptor beta-like.
    
 0.942
PDGFC
Platelet-derived growth factor C-like.
     
 0.930
LOC115170724
Platelet-derived growth factor C-like.
     
 0.930
ENSSTUP00000029861
annotation not available
    
 0.924
ENSSTUP00000097928
annotation not available
    
 0.924
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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