Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001392annotation not available (140 aa)    
Predicted Functional Partners:
mto1
Mitochondrial tRNA translation optimization 1.
      
 0.700
ENSSTUP00000009777
CCR4-NOT transcription complex, subunit 10.
      
 0.696
tada2b
Transcriptional adaptor 2B.
      
 0.696
LOC115177149
CCR4-NOT transcription complex subunit 10-like.
      
 0.696
LOC115194112
Transcriptional adapter 2-beta-like.
      
 0.696
LOC115192588
UBX domain-containing protein 6-like.
   
   0.668
LOC115158293
UBX domain-containing protein 6-like.
   
   0.668
LOC115181386
Coiled-coil domain-containing protein 127-like.
      
 0.604
LOC115181387
Coiled-coil domain-containing protein 127-like.
      
 0.604
ccdc127
Coiled-coil domain containing 127.
      
 0.604
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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