Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC115201308N-acetylmuramoyl-L-alanine amidase-like. (515 aa)    
Predicted Functional Partners:
ENSSTUP00000071140
annotation not available
   
 
 0.848
LOC115208616
N-acetylmuramoyl-L-alanine amidase-like.
   
 
 0.848
ENSSTUP00000070689
Peptidoglycan recognition protein 5.
   
 
 0.740
mitd1
Microtubule interacting and trafficking domain containing 1.
      
 0.723
LOC115173522
Carcinoembryonic antigen-related cell adhesion molecule 1-like.
  
 0.710
LOC115175947
Carcinoembryonic antigen-related cell adhesion molecule 6-like.
  
 0.710
LOC115183305
B-cell lymphoma 3 protein homolog.
  
 0.710
ENSSTUP00000074311
annotation not available
  
 0.710
LOC115184123
Carcinoembryonic antigen-related cell adhesion molecule 1-like.
  
 0.710
LOC115176686
Carcinoembryonic antigen-related cell adhesion molecule 20-like.
  
 0.710
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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