Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001429Mitochondrial ribosomal protein S5. (278 aa)    
Predicted Functional Partners:
mrps6
Mitochondrial ribosomal protein S6.
  
 0.998
mrps25
Mitochondrial ribosomal protein S25.
   
 0.998
mrps14
Mitochondrial ribosomal protein S14.
  
 0.997
ENSSTUP00000053802
Mitochondrial ribosomal protein S10.
  
 0.997
ENSSTUP00000029822
Mitochondrial ribosomal protein S9.
  
 0.996
ENSSTUP00000065610
Mitochondrial ribosomal protein S15.
  
 0.996
mrps21
Mitochondrial ribosomal protein S21.
   
 0.996
LOC115177214
28S ribosomal protein S15, mitochondrial-like.
  
 0.996
ENSSTUP00000108746
Mitochondrial ribosomal protein S9.
  
 0.996
ENSSTUP00000018133
annotation not available
   
 0.995
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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