Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001447Otopetrin 2. (578 aa)    
Predicted Functional Partners:
LOC115208275
Transmembrane protein 128-like.
      
 0.606
LOC115150193
Transmembrane protein 128-like.
      
 0.606
LOC115153802
Transmembrane and immunoglobulin domain-containing protein 1-like.
      
 0.581
LOC115149874
Guanylin-like.
      
 0.546
LOC115207716
Guanylin-like.
      
 0.546
LOC115202899
Carbonic anhydrase 7-like.
   
  
 0.543
LOC115167397
Carbonic anhydrase 7-like.
   
  
 0.543
LOC115156236
SAP30-binding protein-like.
      
 0.536
ENSSTUP00000111488
SAP30 binding protein.
      
 0.536
ENSSTUP00000040911
annotation not available
      
 0.502
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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