STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115203994Transmembrane and ubiquitin-like domain-containing protein 2. (309 aa)    
Predicted Functional Partners:
LOC115156497
Transmembrane and ubiquitin-like domain-containing protein 1.
  
 
 
0.753
LOC115190950
Serine/threonine-protein kinase 3-like.
    
 0.665
stk4
Serine/threonine kinase 4.
    
 0.665
STK3
Serine/threonine-protein kinase 3.
    
 0.665
LOC115200361
Erlin-2.
    
 
 0.562
ERLIN2
Erlin-2-like.
    
 
 0.562
LOC115194058
Erlin-1.
    
 
 0.562
LOC115151655
Membralin-like.
    
 
 0.547
LOC115158088
Membralin-like.
    
 
 0.547
ENSSTUP00000085258
Myosin, light chain 1, alkali; skeletal, fast.
   
  
 0.502
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.