Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
thumpd2THUMP domain containing 2. (503 aa)    
Predicted Functional Partners:
LOC115202798
Bifunctional glutamate/proline--tRNA ligase-like.
  
  
 0.742
EPRS1
Bifunctional glutamate/proline--tRNA ligase-like.
  
  
 0.742
ENSSTUP00000019739
Si:ch211-66i15.4.
      
 0.723
extl2
Exostosin like glycosyltransferase 2.
      
 0.707
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.707
LOC115176766
tRNA (guanine(10)-N2)-methyltransferase homolog.
     
 0.705
TRMT11
tRNA (guanine(10)-N2)-methyltransferase homolog.
     
 0.705
LOC115160937
Signal transducing adapter molecule 2-like.
      
 0.701
LOC115155602
Signal transducing adapter molecule 2-like.
      
 0.701
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
      
 0.685
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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