Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSTUP00000001463Purine-rich element binding protein G. (342 aa)    
Predicted Functional Partners:
LOC115200528
Transcriptional activator protein Pur-beta-like.
   
   0.705
rfc3
Replication factor C subunit 3.
    
   0.642
LOC115165830
Transcription factor E2F1-like.
    
 
 0.616
LOC115168160
Transcription factor E2F1-like.
    
 
 0.616
LOC115198153
RNA-binding protein 4.1-like.
    
 
 0.612
LOC115194143
RNA-binding protein 4.1-like.
    
 
 0.612
LOC115188439
Zinc finger CCHC-type and RNA-binding motif-containing protein 1-like.
    
   0.601
LOC115188440
Zinc finger CCHC-type and RNA-binding motif-containing protein 1-like.
    
   0.601
LOC115157187
Cyclin-dependent-like kinase 5.
    
 
 0.581
LOC115169592
Cyclin-dependent-like kinase 5.
    
 
 0.581
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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