Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171549Ankyrin repeat and SOCS box protein 16-like. (464 aa)    
Predicted Functional Partners:
LOC115154531
Ankyrin repeat and SOCS box protein 12-like.
  
 
0.796
ENSSTUP00000058102
Ankyrin repeat and SOCS box-containing 12a.
   
 
 0.763
LOC115158517
Oxysterol-binding protein-related protein 7-like.
    
 0.746
neurl2
Neuralized E3 ubiquitin protein ligase 2.
    
 0.703
ENSSTUP00000041399
Leucine rich repeat containing 30a.
   
 0.698
ENSSTUP00000079718
annotation not available
   
 0.698
lrrc14b
Leucine rich repeat containing 14B.
   
  
 0.691
LOC115152735
Leucine-rich repeat-containing protein 20-like.
   
 0.686
LOC115152735-2
Leucine-rich repeat-containing protein 20-like.
   
 0.686
ENSSTUP00000009577
COMM domain containing 9.
    
  0.678
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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