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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115192182Anoctamin-8-like. (1121 aa)    
Predicted Functional Partners:
LOC115174863
Hairy/enhancer-of-split related with YRPW motif protein 2.
      
 0.546
plvap
Plasmalemma vesicle associated protein.
      
 0.546
nr2f6
Nuclear receptor subfamily 2 group F member 6.
      
 0.546
LOC115178447
RNA-binding protein 8A-like.
      
 0.546
LOC115178481
bolA-like protein 1.
      
 0.546
ENSSTUP00000088050
bolA family member 1.
      
 0.546
LOC115176890
RNA-binding protein 8A.
      
 0.546
ENSSTUP00000057714
BTB (POZ) domain containing 17a.
      
 0.537
TBCCD1
TBCC domain containing 1.
      
 0.457
LOC115193628
Hairy/enhancer-of-split related with YRPW motif protein 2-like.
      
 0.412
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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