Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115192182Anoctamin-8-like. (1121 aa)    
Predicted Functional Partners:
plvap
Plasmalemma vesicle associated protein.
      
 0.734
nr2f6
Nuclear receptor subfamily 2 group F member 6.
      
 0.734
LOC115174863
Hairy/enhancer-of-split related with YRPW motif protein 2.
      
 0.714
ENSSTUP00000057714
BTB (POZ) domain containing 17a.
      
 0.664
fabp7
Fatty acid binding protein 7.
      
 0.659
LOC115174855
Fatty acid-binding protein, brain-like.
      
 0.659
LOC115199746
Nuclear receptor subfamily 2 group F member 1-A-like.
      
 0.654
LOC115164923
Nuclear receptor subfamily 2 group F member 1-A.
      
 0.654
LOC115193628
Hairy/enhancer-of-split related with YRPW motif protein 2-like.
      
 0.640
LOC115178481
bolA-like protein 1.
      
 0.625
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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