Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001487annotation not available (133 aa)    
Predicted Functional Partners:
ENSSTUP00000053648
Iodothyronine deiodinase 2.
     
 0.816
ENSSTUP00000068522
Iodothyronine deiodinase 2.
     
 0.816
ENSSTUP00000015370
Iodothyronine deiodinase 1.
     
 0.670
ENSSTUP00000015393
Iodothyronine deiodinase 1.
     
 0.670
ENSSTUP00000086915
Iodothyronine deiodinase 1.
     
 0.670
DLK1
Delta like non-canonical Notch ligand 1.
      
 0.600
LOC115174102
Eyes absent homolog 3-like.
      
 0.503
LOC115175622
Eyes absent homolog 3-like.
      
 0.503
trh
Thyrotropin releasing hormone.
      
 0.485
TRH
Pro-thyrotropin-releasing hormone-A-like.
      
 0.485
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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